biolm.cli package

Submodules

biolm.cli.entry module

Entry point wrapper to suppress urllib3 warnings.

class biolm.cli.entry.FilteredStderr(original_stderr)

Bases: object

flush()

write(text)

biolm.cli.theme module

Terminal-aware Rich theme for the biolm CLI.

biolm.cli.theme.build_theme(*, dark: bool, plain: bool = False) → Theme

biolm.cli.theme.create_console(*, no_color: bool | None = None, theme_mode: Literal['auto', 'light', 'dark'] | None = None) → Console

Create a Rich Console with terminal-appropriate colors.

biolm.cli.theme.no_color_requested() → bool

True when NO_COLOR is set (https://no-color.org/).

biolm.cli.theme.resolve_theme_mode(explicit: Literal['auto', 'light', 'dark'] | None = None) → Literal['auto', 'light', 'dark']

Resolve theme mode from flag, BIOLM_CLI_THEME env, or auto.

biolm.cli.theme.terminal_is_dark() → bool

Best-effort detection of dark terminal background (xterm COLORFGBG).

Module contents

Console script for biolm.

class biolm.cli.RichCommand(name: str | None, context_settings: MutableMapping[str, Any] | None = None, callback: Callable[[...], Any] | None = None, params: list[click.core.Parameter] | None = None, help: str | None = None, epilog: str | None = None, short_help: str | None = None, options_metavar: str | None = '[OPTIONS]', add_help_option: bool = True, no_args_is_help: bool = False, hidden: bool = False, deprecated: bool | str = False)

Bases: Command

Custom Click Command with Rich help formatting.

format_help(ctx, formatter)

Format help output using Rich with styled organization.

write_usage(ctx, formatter)

Write usage line with Rich formatting.

class biolm.cli.RichGroup(name: str | None = None, commands: MutableMapping[str, Command] | Sequence[Command] | None = None, invoke_without_command: bool = False, no_args_is_help: bool | None = None, subcommand_metavar: str | None = None, chain: bool = False, result_callback: Callable[[...], Any] | None = None, **kwargs: Any)

Bases: Group

Custom Click Group with Rich help formatting.

command_class

alias of RichCommand

format_help(ctx, formatter)

Format help output using Rich with styled organization.

write_usage(ctx, formatter)

Write usage line with Rich formatting.

class biolm.cli.RichHelpFormatter(indent_increment: int = 2, width: int | None = None, max_width: int | None = None)

Bases: HelpFormatter

Custom help formatter using Rich for styled output.

write_dl(rows, col_max=30, col_spacing=2)

Write definition list (command/option + description) with Rich formatting.

write_heading(heading)

Write section heading with Rich formatting.

write_usage(prog, args='', prefix='Usage: ')

Write usage line with Rich formatting.

biolm.cli.display_env_vars_table()

Display environment variables in a formatted Rich table.