Stable release
To install BioLM SDK, run this command in your terminal:
bash
$ pip install biolm-sdk
Optional extras:
bash
$ pip install "biolm-sdk[pipeline]" # pipeline features
$ pip install "biolm-sdk[mlflow]" # MLflow datasets and protocol logging (CLI)
For open-source models, install and run biolm-hub,
then connect with biolm hub set. See biolm hub.
The [mlflow] extra is required for biolm dataset and biolm protocol log.
See SDK plugins.
The biolmai package name is deprecated; use biolm-sdk. See Migration to biolm-sdk 1.0.
If you don’t have pip installed, this Python installation guide can guide you through the process.
From sources
The sources for biolm-sdk can be downloaded from the GitHub repo.
You can either clone the public repository:
bash
$ git clone git@github.com:BioLM/biolm-sdk.git
Or download the tarball:
bash
$ curl -OJL https://github.com/BioLM/biolm-sdk/tarball/main
Once you have a copy of the source, you can install it with:
bash
$ pip install -e .